Basic Information
Locus ID:
gene-QYE76_038394
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 15787566 | 15796008 | + | gene-QYE76_038394 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 101,614.70 Da | 48.47 | 83.72 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 225 | 315 | 3.7E-9 | IPR005162 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 588 | 672 | 2.33E-20 | IPR043502 |
| Gene3D | G3DSA:3.30.70.270 | - | 507 | 652 | 2.5E-20 | IPR043128 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 719 | 759 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 719 | 746 | - | - |
| Coils | Coil | Coil | 870 | 890 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_028201962.1 | uncharacterized protein K02A2.6-like, partial [Glycine soja] | 0 |
| TrEMBL | M8BEJ4 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 203 | gene-QYE76_000478, gene-QYE76_000950, gene-QYE76_001438 ... |