Basic Information
Locus ID:
gene-QYE76_038376
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 15118270 | 15121151 | + | gene-QYE76_038376 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 29,549.93 Da | 33.94 | 89.02 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 225 | 267 | 2.26326E-20 | - |
| CDD | cd02123 | PA_C_RZF_like | 5 | 149 | 6.40482E-47 | IPR044744 |
| Pfam | PF13639 | Ring finger domain | 224 | 267 | 1.5E-12 | IPR001841 |
| Pfam | PF02225 | PA domain | 74 | 136 | 2.6E-10 | IPR003137 |
| SUPERFAMILY | SSF57850 | RING/U-box | 220 | 271 | 1.65E-17 | - |
| SUPERFAMILY | SSF52025 | PA domain | 76 | 143 | 4.45E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 186 | 271 | 1.8E-19 | IPR013083 |
| Gene3D | G3DSA:3.50.30.30 | - | 21 | 154 | 4.3E-28 | - |
| SMART | SM00184 | ring_2 | 225 | 266 | 1.0E-9 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 225 | 267 | 12.622055 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66160.2 | receptor homology region transmembrane domain ring H2 motif protein 1. Encodes a receptor homology region transmembrane domain, ring H2 motif protein involved in transport of storage proteins to protein storage vacuoles. Co-localizes with DIP positive vesicles. | 0 |
| RefSeq | XP_051213270.1 | receptor homology region, transmembrane domain- and RING domain-containing protein 1 [Lolium perenne] | 0 |
| Q9M622 | Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=RMR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D5UWP7 | Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS524 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology