Basic Information
Locus ID:
gene-QYE76_038338
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 14206329 | 14219265 | + | gene-QYE76_038338 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 85,329.22 Da | 42.53 | 90.56 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 16 | 126 | 1.4E-8 | IPR000477 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 585 | 695 | 1.4E-8 | IPR000477 |
| ProSiteProfiles | PS50878 | Reverse transcriptase (RT) catalytic domain profile. | 1 | 127 | 9.716076 | IPR000477 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051211143.1 | uncharacterized protein LOC127328591 [Lolium perenne] | 0 |
| TrEMBL | N1QZS4 | DUF295 domain-containing protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | AH03.662, AH09.1451, AH09.1452, BH09.1634, BH09.1635 ... |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0561220, gene-QOZ80_7BG0593910 |
| Poaceae | Hordeum vulgare | 4 | HORVU.MOREX.r3.6HG0548180.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_012356, gene-QYE76_038338 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g39600.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_03G028100, gene-BS78_K021500 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0505518, Pt_Chr0705397 |
| Poaceae | Thinopyrum elongatum | 4 | Tel1E01G304800, Tel3E01G131000, Tel6E01G149700 ... |
| Poaceae | Triticum aestivum | 11 | TraesCS1A02G171900.1.cds1, TraesCS1B02G184800.1.cds1 ... |