halophFGD

Basic Information

Locus ID: gene-QYE76_038245

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: Belongs to the adaptor complexes medium subunit family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	12143494	12146630	-	gene-QYE76_038245

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.89	69,117.23 Da	65.47	60.72	-0.83

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF01693	Caulimovirus viroplasmin	415	455	4.6E-16	IPR011320
SUPERFAMILY	SSF55658	L9 N-domain-like	414	456	4.76E-12	IPR009027
Gene3D	G3DSA:3.40.970.10	-	413	460	2.5E-16	IPR037056
MobiDBLite	mobidb-lite	consensus disorder prediction	99	118	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	525	572	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	57	153	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	581	614	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	514	614	-	-
Coils	Coil	Coil	528	580	-	-

KEGG Pathway

KO Term:

K12398 (AP-3 complex subunit mu)

Best hit

Source	Best Hit ID	Description
RefSeq	XP_051190173.1	uncharacterized protein LOC127303487 [Lolium perenne]
Swiss-Prot	Q9KEI9	Ribonuclease H OS=Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=rnhA PE=1 SV=1
TrEMBL	A0A7H4LNB6	Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS4733 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	82	gene-QYE76_000727, gene-QYE76_001970, gene-QYE76_002900 ... gene-QYE76_003629, gene-QYE76_003947, gene-QYE76_007139, gene-QYE76_007623, gene-QYE76_007847, gene-QYE76_009702, gene-QYE76_010655, gene-QYE76_010870, gene-QYE76_011017, gene-QYE76_011238, gene-QYE76_011473, gene-QYE76_012005, gene-QYE76_015840, gene-QYE76_018238, gene-QYE76_018770, gene-QYE76_019225, gene-QYE76_019983, gene-QYE76_020748, gene-QYE76_022470, gene-QYE76_023929, gene-QYE76_023994, gene-QYE76_024076, gene-QYE76_024722, gene-QYE76_025408, gene-QYE76_026656, gene-QYE76_026768, gene-QYE76_026779, gene-QYE76_027118, gene-QYE76_028332, gene-QYE76_030144, gene-QYE76_030862, gene-QYE76_033369, gene-QYE76_033537, gene-QYE76_035459, gene-QYE76_036682, gene-QYE76_036683, gene-QYE76_036786, gene-QYE76_037029, gene-QYE76_038245, gene-QYE76_039973, gene-QYE76_040752, gene-QYE76_040909, gene-QYE76_041683, gene-QYE76_041696, gene-QYE76_041841, gene-QYE76_042144, gene-QYE76_042175, gene-QYE76_042243, gene-QYE76_042386, gene-QYE76_042389, gene-QYE76_042395, gene-QYE76_042969, gene-QYE76_043087, gene-QYE76_043724, gene-QYE76_045841, gene-QYE76_047965, gene-QYE76_049068, gene-QYE76_049992, gene-QYE76_051033, gene-QYE76_053038, gene-QYE76_053098, gene-QYE76_053221, gene-QYE76_054121, gene-QYE76_055239, gene-QYE76_056309, gene-QYE76_056966, gene-QYE76_058267, gene-QYE76_059436, gene-QYE76_060539, gene-QYE76_061004, gene-QYE76_062333, gene-QYE76_062911, gene-QYE76_064364, gene-QYE76_065182, gene-QYE76_065689, gene-QYE76_066084, gene-QYE76_066738, gene-QYE76_067172, gene-QYE76_071008