Basic Information
Locus ID:
gene-QYE76_038239
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 12006491 | 12010839 | - | gene-QYE76_038239 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 87,647.88 Da | 43.12 | 85.11 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 709 | 750 | 4.35571E-24 | - |
| CDD | cd01989 | STK_N | 32 | 189 | 1.6322E-36 | - |
| Pfam | PF04564 | U-box domain | 705 | 776 | 7.6E-19 | IPR003613 |
| Pfam | PF00582 | Universal stress protein family | 31 | 154 | 6.4E-6 | IPR006016 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 423 | 672 | 7.3E-39 | IPR001245 |
| SUPERFAMILY | SSF57850 | RING/U-box | 691 | 775 | 3.53E-27 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 399 | 672 | 2.29E-63 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 33 | 152 | 5.19E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 396 | 488 | 5.6E-27 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 15 | 163 | 4.4E-7 | IPR014729 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 704 | 777 | 1.5E-28 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 489 | 687 | 1.1E-44 | - |
| SMART | SM00220 | serkin_6 | 418 | 683 | 2.8E-23 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 708 | 771 | 1.8E-30 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 704 | 777 | 38.126732 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 418 | 683 | 31.834728 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 534 | 546 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| Coils | Coil | Coil | 369 | 389 | - | - |
| Coils | Coil | Coil | 320 | 354 | - | - |
| Coils | Coil | Coil | 155 | 175 | - | - |
| Coils | Coil | Coil | 292 | 312 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_051213148.1 | U-box domain-containing protein 33-like isoform X2 [Lolium perenne] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0Q3LG14 | RING-type E3 ubiquitin transferase OS=Brachypodium distachyon OX=15368 GN=100826586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology