Basic Information
Locus ID:
gene-QYE76_038116
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 8144997 | 8160574 | - | gene-QYE76_038116 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 172,476.52 Da | 43.21 | 88.98 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09274 | RNase_HI_RT_Ty3 | 1193 | 1311 | 1.12236E-56 | - |
| CDD | cd01647 | RT_LTR | 960 | 1099 | 2.60833E-35 | - |
| CDD | cd01647 | RT_LTR | 10 | 189 | 5.81788E-68 | - |
| CDD | cd00303 | retropepsin_like | 653 | 750 | 3.42445E-12 | - |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 28 | 178 | 7.6E-21 | IPR000477 |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 1162 | 1260 | 4.0E-34 | IPR041577 |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 252 | 327 | 5.7E-8 | IPR041577 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 8 | 326 | 2.33E-93 | IPR043502 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 919 | 1294 | 9.67E-110 | IPR043502 |
| SUPERFAMILY | SSF50630 | Acid proteases | 650 | 758 | 4.45E-5 | IPR021109 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 922 | 1019 | 1.4E-20 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 634 | 772 | 2.1E-17 | IPR021109 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 7 | 114 | 1.2E-54 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 198 | 280 | 4.3E-19 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 1020 | 1033 | 1.4E-20 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 1034 | 1105 | 1.2E-22 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 54 | 189 | 1.2E-54 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 1108 | 1201 | 1.2E-27 | IPR043128 |
| Coils | Coil | Coil | 1398 | 1418 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_019098329.1 | PREDICTED: uncharacterized protein LOC109131614, partial [Camelina sativa] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A2G9HYA0 | RNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04802 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |