Basic Information
Locus ID:
gene-QYE76_038081
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RING-variant domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 7142727 | 7145474 | - | gene-QYE76_038081 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 54,368.19 Da | 54.28 | 76.65 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 253 | 301 | 3.52616E-15 | - |
| Pfam | PF12906 | RING-variant domain | 253 | 300 | 5.6E-11 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 249 | 304 | 4.28E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 237 | 308 | 1.1E-15 | IPR013083 |
| SMART | SM00744 | ringv_2 | 252 | 301 | 8.4E-18 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 245 | 307 | 19.381987 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 77 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 508 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 22 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60580.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_047066429.1 | uncharacterized protein LOC124674424 [Lolium rigidum] | 0 |
| TrEMBL | I1IVY1 | RING-CH-type domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100836924 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology