Basic Information
Locus ID:
gene-QYE76_037135
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 338642701 | 338652725 | + | gene-QYE76_037135 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 168,532.27 Da | 43.20 | 88.90 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01647 | RT_LTR | 1017 | 1156 | 1.02118E-35 | - |
| CDD | cd00303 | retropepsin_like | 710 | 807 | 3.81598E-12 | - |
| CDD | cd09274 | RNase_HI_RT_Ty3 | 1250 | 1336 | 7.07281E-34 | - |
| Pfam | PF03478 | Protein of unknown function (DUF295) | 338 | 375 | 6.5E-5 | IPR005174 |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 1219 | 1284 | 2.3E-15 | IPR041577 |
| Pfam | PF03732 | Retrotransposon gag protein | 410 | 500 | 4.2E-9 | IPR005162 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 976 | 1319 | 5.69E-94 | IPR043502 |
| SUPERFAMILY | SSF50630 | Acid proteases | 707 | 815 | 7.5E-5 | IPR021109 |
| Gene3D | G3DSA:3.30.70.270 | - | 1165 | 1258 | 1.3E-27 | IPR043128 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 979 | 1076 | 1.4E-20 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 691 | 829 | 6.3E-17 | IPR021109 |
| Gene3D | G3DSA:3.30.70.270 | - | 1077 | 1090 | 1.4E-20 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 1091 | 1162 | 1.1E-22 | IPR043128 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1401 | 1444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021744072.1 | uncharacterized protein LOC110710127 [Chenopodium quinoa] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A2G9HYA0 | RNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04802 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |