Basic Information
Locus ID:
gene-QYE76_037059
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
PHD zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 336080748 | 336085782 | - | gene-QYE76_037059 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 79,646.39 Da | 38.63 | 79.27 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00628 | PHD-finger | 374 | 415 | 8.1E-8 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 126 | 173 | 9.1E-14 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 307 | 357 | 3.0E-17 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 612 | 704 | 4.7E-7 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 361 | 416 | 1.07E-15 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 462 | 515 | 6.58E-8 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 359 | 443 | 2.7E-18 | IPR013083 |
| Gene3D | G3DSA:3.40.630.30 | - | 560 | 714 | 4.4E-5 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 461 | 520 | 3.0E-11 | IPR013083 |
| SMART | SM00249 | PHD_3 | 373 | 414 | 1.2E-10 | IPR001965 |
| SMART | SM00249 | PHD_3 | 461 | 518 | 4.5E-4 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 371 | 416 | 10.504601 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 374 | 413 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 88 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_047090413.1 | uncharacterized protein LOC124702324 [Lolium rigidum] | 0 |
| Q14839 | Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens OX=9606 GN=CHD4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0Q3H1Q5 | PHD-type domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100835479 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology