Basic Information
Locus ID:
gene-QYE76_036876
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
FFAT motif binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 330863369 | 330886209 | + | gene-QYE76_036876 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 103,988.30 Da | 40.37 | 84.97 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 615 | 892 | 2.60956E-46 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 735 | 774 | 3.8E-6 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 33 | 300 | 1.4E-48 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 333 | 430 | 1.7E-14 | IPR000535 |
| Pfam | PF00400 | WD domain, G-beta repeat | 782 | 818 | 0.0012 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 823 | 859 | 0.02 | IPR001680 |
| SUPERFAMILY | SSF49354 | PapD-like | 323 | 456 | 1.23E-19 | IPR008962 |
| SUPERFAMILY | SSF49354 | PapD-like | 460 | 567 | 6.54E-8 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 17 | 301 | 3.51E-69 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 611 | 893 | 1.28E-50 | IPR036322 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 326 | 450 | 1.2E-26 | IPR013783 |
| Gene3D | G3DSA:2.130.10.10 | - | 609 | 902 | 1.2E-70 | IPR015943 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 10 | 102 | 1.7E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 124 | 324 | 3.3E-51 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 455 | 585 | 2.1E-13 | IPR013783 |
| SMART | SM00320 | WD40_4 | 641 | 679 | 7.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 777 | 818 | 9.9E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 680 | 721 | 1.8 | IPR001680 |
| SMART | SM00220 | serkin_6 | 31 | 308 | 1.1E-38 | IPR000719 |
| SMART | SM00320 | WD40_4 | 734 | 774 | 8.9E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 821 | 859 | 7.0E-4 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 331 | 450 | 17.619282 | IPR000535 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 741 | 783 | 13.716598 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 784 | 827 | 11.912015 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 31 | 306 | 35.73571 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 741 | 777 | 10.68014 | - |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 460 | 581 | 10.035042 | IPR000535 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 827 | 859 | 9.004632 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 784 | 819 | 9.493783 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 37 | 58 | - | IPR017441 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 805 | 819 | - | IPR019775 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 165 | 177 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_044430725.1 | uncharacterized protein LOC123156650 isoform X1 [Triticum aestivum] | 0 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 0 | |
| TrEMBL | A0A3B6STS7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | BH05.3525, CH04.920, CH05.3680, Contig522.28 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_5AG0380720, gene-QOZ80_5BG0439080 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0225170.1, HORVU.MOREX.r3.7HG0748020.1 |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_036867, gene-QYE76_036876, gene-QYE76_036884 ... |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_06G051900, gene-BS78_08G093000 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0401585 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G157900, Tel7E01G940400 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC3AG004390, gene_TRIDC7AG075260 ... |
| Poaceae | Triticum aestivum | 20 | TraesCS3A02G073900.1, TraesCS3D02G522300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb164620_P001 |