Basic Information
Locus ID:
gene-QYE76_036868
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
FFAT motif binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 330683482 | 330700659 | + | gene-QYE76_036868 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 84,838.24 Da | 43.54 | 76.57 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 458 | 733 | 6.56664E-43 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 576 | 615 | 2.9E-6 | IPR001680 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 35 | 118 | 5.2E-14 | IPR000535 |
| Pfam | PF00400 | WD domain, G-beta repeat | 623 | 659 | 5.1E-5 | IPR001680 |
| SUPERFAMILY | SSF49354 | PapD-like | 313 | 432 | 3.66E-9 | IPR008962 |
| SUPERFAMILY | SSF49354 | PapD-like | 21 | 148 | 2.62E-18 | IPR008962 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 461 | 742 | 1.12E-49 | IPR036322 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 22 | 148 | 7.4E-24 | IPR013783 |
| Gene3D | G3DSA:2.130.10.10 | - | 459 | 743 | 6.8E-66 | IPR015943 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 307 | 436 | 6.6E-14 | IPR013783 |
| SMART | SM00320 | WD40_4 | 575 | 615 | 5.6E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 618 | 659 | 9.5E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 662 | 700 | 0.0023 | IPR001680 |
| SMART | SM00320 | WD40_4 | 490 | 527 | 58.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 447 | 487 | 120.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 531 | 568 | 0.029 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 625 | 660 | 9.704691 | - |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 26 | 145 | 16.548309 | IPR000535 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 313 | 434 | 9.903902 | IPR000535 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 582 | 618 | 10.442869 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 625 | 668 | 12.446706 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 582 | 624 | 13.415834 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 646 | 660 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 212 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52360.3 | - | 0 |
| RefSeq | XP_047087152.1 | uncharacterized protein LOC124698751 isoform X2 [Lolium rigidum] | 0 |
| Q9C827 | Coatomer subunit beta'-2 OS=Arabidopsis thaliana OX=3702 GN=At1g52360 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453T9Y0 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology