Basic Information
Locus ID:
gene-QYE76_036774
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Polyubiquitin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 328517874 | 328519806 | - | gene-QYE76_036774 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 40,500.77 Da | 43.23 | 80.52 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 35 | 96 | 4.43192E-14 | - |
| Pfam | PF00240 | Ubiquitin family | 36 | 96 | 2.9E-13 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 232 | 288 | 5.3E-9 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 36 | 98 | 6.53E-14 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 98 | 228 | 3.88E-7 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 197 | 287 | 9.31E-10 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 33 | 98 | 9.2E-17 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 228 | 290 | 3.7E-9 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 99 | 227 | 9.0E-13 | - |
| SMART | SM00213 | ubq_7 | 218 | 292 | 9.6E-5 | IPR000626 |
| SMART | SM00213 | ubq_7 | 15 | 98 | 6.5E-9 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 218 | 289 | 14.948022 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 15 | 96 | 16.428747 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 56 | 76 | 1.1E-9 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 35 | 55 | 1.1E-9 | IPR019956 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.1 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_051201456.1 | polyubiquitin 11-like [Lolium perenne] | 0 |
| P0CH33 | Polyubiquitin 11 OS=Arabidopsis thaliana OX=3702 GN=UBQ11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8J4GBA3 | Polyubiquitin OS=Volvox reticuliferus OX=1737510 GN=Vretifemale_6369 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_018813, gene-QYE76_036770, gene-QYE76_036774 ... |