Basic Information
Locus ID:
gene-QYE76_036770
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Polyubiquitin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 328435282 | 328436202 | - | gene-QYE76_036770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 34,233.81 Da | 46.00 | 87.22 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 18 | 75 | 3.51747E-11 | - |
| Pfam | PF00240 | Ubiquitin family | 13 | 76 | 5.5E-11 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 167 | 219 | 1.7E-11 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 83 | 162 | 6.8E-14 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 80 | 162 | 1.73E-16 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 170 | 218 | 5.53E-11 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 5 | 75 | 6.22E-12 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 80 | 165 | 2.5E-19 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 166 | 224 | 6.5E-12 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 79 | 3.5E-14 | - |
| SMART | SM00213 | ubq_7 | 162 | 232 | 0.43 | IPR000626 |
| SMART | SM00213 | ubq_7 | 1 | 77 | 1.3E-8 | IPR000626 |
| SMART | SM00213 | ubq_7 | 80 | 161 | 3.1E-11 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 156 | 217 | 14.752043 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 80 | 161 | 15.884364 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 76 | 14.62139 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 168 | 188 | 1.7E-6 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 210 | 231 | 1.7E-6 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 189 | 209 | 1.7E-6 | IPR019956 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35635.1 | ubiquitin 7. encodes a ubiquitin-like protein that contains tandem repeats of the ubiquitin coding region, but at least one repeat per gene encodes a protein with amino acid substitutions. | 0 |
| RefSeq | XP_051201458.1 | uncharacterized protein LOC127314957 [Lolium perenne] | 0 |
| P0CG70 | Polyubiquitin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=ubi PE=3 SV=1 | 0 | |
| TrEMBL | A0A8J4GBA3 | Polyubiquitin OS=Volvox reticuliferus OX=1737510 GN=Vretifemale_6369 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_018813, gene-QYE76_036770, gene-QYE76_036774 ... |