Basic Information
Locus ID:
gene-QYE76_036768
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 328363260 | 328364279 | + | gene-QYE76_036768 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 37,604.56 Da | 44.18 | 83.69 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 193 | 249 | 6.26532E-6 | - |
| CDD | cd17039 | Ubl_ubiquitin_like | 125 | 173 | 8.8774E-4 | - |
| Pfam | PF00240 | Ubiquitin family | 27 | 100 | 2.2E-11 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 114 | 169 | 2.0E-5 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 101 | 173 | 1.11E-7 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 26 | 105 | 4.51E-13 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 192 | 247 | 2.7E-6 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 7 | 102 | 6.6E-16 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 187 | 258 | 2.6E-7 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 103 | 186 | 2.1E-5 | - |
| SMART | SM00213 | ubq_7 | 14 | 100 | 6.3E-9 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 102 | 173 | 9.329968 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 14 | 101 | 17.539293 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 188 | 249 | 9.961455 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09790.1 | ubiquitin 8. encodes a ubiquitin-like protein that contains tandem repeats of the ubiquitin coding region, but at least one repeat per gene encodes a protein with amino acid substitutions. | 0 |
| RefSeq | XP_051202780.1 | polyubiquitin-like isoform X3 [Lolium perenne] | 0 |
| Q39256 | Polyubiquitin 8 OS=Arabidopsis thaliana OX=3702 GN=UBQ8 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0S2MM82 | Polyubiquitin 4-like protein OS=Paeonia lactiflora OX=35924 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for gene-QYE76_036768.