Basic Information
Locus ID:
gene-QYE76_036628
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 324089597 | 324098051 | + | gene-QYE76_036628 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 76,454.26 Da | 50.48 | 87.35 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 425 | 474 | 2.6E-10 | IPR041577 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 309 | 475 | 4.45E-47 | IPR043502 |
| Gene3D | G3DSA:3.30.70.270 | - | 226 | 372 | 3.9E-18 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 375 | 440 | 6.7E-17 | IPR043128 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 664 | 684 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 106 | - | - |
| Coils | Coil | Coil | 566 | 586 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048538050.1 | uncharacterized protein LOC125516778, partial [Triticum urartu] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A2N9GXZ8 | Retrovirus-related Pol polyprotein from transposon 17.6 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32377 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |