Basic Information
Locus ID:
gene-QYE76_036535
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
CMT1
Description:
Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 320338898 | 320340878 | + | gene-QYE76_036535 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 41,296.99 Da | 23.00 | 91.04 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 2 | 320 | 5.8E-26 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 2 | 320 | 1.16E-48 | IPR029063 |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 113 | 286 | 1.1E-62 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 1 | 112 | 1.1E-16 | - |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 1 | 327 | 30.742035 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 54 | 67 | 4.3E-5 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 8 | 22 | 4.3E-5 | IPR001525 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69770.1 | chromomethylase 3. Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing. | 0 |
| RefSeq | XP_051197690.1 | DNA (cytosine-5)-methyltransferase CMT1-like [Lolium perenne] | 0 |
| Q8LPU5 | DNA (cytosine-5)-methyltransferase 3 OS=Zea mays OX=4577 GN=DMT105 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K2DU51 | DNA (cytosine-5-)-methyltransferase OS=Brachypodium distachyon OX=15368 GN=BRADI_1g68985v3 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology