HalophFGD

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Basic Information
Locus ID: gene-QYE76_036220
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: BTB/POZ domain
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 311740980 311742071 - gene-QYE76_036220
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.37 39,603.96 Da 39.36 94.41 0.02
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd18280 BTB_POZ_BPM_plant 178 292 3.705E-52 -
CDD cd00121 MATH 18 144 3.07552E-12 IPR002083
Pfam PF00651 BTB/POZ domain 183 293 2.9E-25 IPR000210
SUPERFAMILY SSF49599 TRAF domain-like 17 148 4.58E-17 -
SUPERFAMILY SSF54695 POZ domain 174 295 7.06E-31 IPR011333
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 16 147 6.6E-17 IPR008974
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 170 289 3.0E-38 IPR011333
Gene3D G3DSA:1.25.40.420 - 296 363 3.6E-18 -
SMART SM00225 BTB_4 192 296 1.8E-24 IPR000210
ProSiteProfiles PS50097 BTB domain profile. 192 259 17.437971 IPR000210
ProSiteProfiles PS50144 MATH/TRAF domain profile. 13 143 12.080854 IPR002083
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G39760.1 BTB/POZ/MATH-domains containing protein. 0
RefSeq XP_051198434.1 BTB/POZ and MATH domain-containing protein 3-like [Lolium perenne] 0
Swiss-Prot O22286 BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 0
TrEMBL M8B6A2 Speckle-type POZ protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 5 AH06.2612, BH06.2420, BH06.2421, BH06.2422, CH06.2709
Poaceae Eleusine coracana subsp. coracana 12 gene-QOZ80_5AG0391060, gene-QOZ80_6AG0515720 ...
gene-QOZ80_6AG0547660, gene-QOZ80_6AG0547680, gene-QOZ80_6AG0547700, gene-QOZ80_6AG0547710, gene-QOZ80_6BG0501300, gene-QOZ80_6BG0501320, gene-QOZ80_6BG0501340, gene-QOZ80_6BG0501350, gene-QOZ80_6BG0501360, gene-QOZ80_7AG0564860
Poaceae Hordeum vulgare 9 HORVU.MOREX.r3.7HG0724460.1.CDS1 ...
HORVU.MOREX.r3.7HG0724690.1.CDS1, HORVU.MOREX.r3.7HG0736960.1.CDS1, HORVU.MOREX.r3.7HG0737010.1.CDS1, HORVU.MOREX.r3.7HG0737030.1.CDS1, HORVU.MOREX.r3.7HG0737070.1.CDS1, HORVU.MOREX.r3.7HG0737090.1.CDS1, HORVU.MOREX.r3.7HG0737240.1.CDS1, HORVU.MOREX.r3.7HG0737300.1.CDS1
Poaceae Lolium multiflorum 19 gene-QYE76_001932, gene-QYE76_001934, gene-QYE76_001937 ...
gene-QYE76_014272, gene-QYE76_020497, gene-QYE76_034670, gene-QYE76_034671, gene-QYE76_034695, gene-QYE76_036220, gene-QYE76_036221, gene-QYE76_036227, gene-QYE76_036232, gene-QYE76_036233, gene-QYE76_036234, gene-QYE76_036240, gene-QYE76_036248, gene-QYE76_036249, gene-QYE76_036250, gene-QYE76_036252
Poaceae Oryza coarctata 4 Oco11G006600, Oco11G014910, Oco12G015040, Oco12G015070
Poaceae Oryza sativa 5 LOC_Os06g14060.1, LOC_Os06g45720.1, LOC_Os06g45730.1 ...
LOC_Os06g45790.1, LOC_Os08g09830.1
Poaceae Paspalum vaginatum 7 gene-BS78_10G106800, gene-BS78_10G221900 ...
gene-BS78_10G222400, gene-BS78_10G222500, gene-BS78_10G222600, gene-BS78_10G222700, gene-BS78_10G222800
Poaceae Puccinellia tenuiflora 4 Pt_Chr0103206, Pt_Chr0103207, Pt_Chr0103208, Pt_Chr0401303
Poaceae Sporobolus alterniflorus 4 Chr10G019930, Chr10G019940, Chr11G002710, Chr27G005970
Poaceae Thinopyrum elongatum 12 Tel7E01G682200, Tel7E01G797600, Tel7E01G799300 ...
Tel7E01G799900, Tel7E01G800000, Tel7E01G800200, Tel7E01G800300, Tel7E01G800400, Tel7E01G800500, Tel7E01G800700, Tel7E01G801600, Tel7E01G803200
Poaceae Triticum dicoccoides 19 gene_TRIDC7AG055940, gene_TRIDC7AG065750 ...
gene_TRIDC7AG065900, gene_TRIDC7AG065940, gene_TRIDC7AG065960, gene_TRIDC7AG065990, gene_TRIDC7AG066010, gene_TRIDC7AG066030, gene_TRIDC7AG066050, gene_TRIDC7AG066110, gene_TRIDC7BG059400, gene_TRIDC7BG059460, gene_TRIDC7BG059480, gene_TRIDC7BG059490, gene_TRIDC7BG059500, gene_TRIDC7BG059530, gene_TRIDC7BG059710, gene_TRIDC7BG059730, gene_TRIDC7BG059750
Poaceae Triticum aestivum 36 TraesCS7A02G401800.1.cds1, TraesCS7A02G471200.1.cds1 ...
TraesCS7A02G471400.1.cds1, TraesCS7A02G471800.1.cds1, TraesCS7A02G471900.1.cds1, TraesCS7A02G472000.1.cds1, TraesCS7A02G472200.1.cds1, TraesCS7A02G472400.1, TraesCS7A02G472500.1, TraesCS7A02G472800.1.cds1, TraesCS7A02G473100.1, TraesCS7A02G473500.1.cds1, TraesCS7A02G474300.1.cds1, TraesCS7A02G474500.1.cds1, TraesCS7B02G373200.1.cds1, TraesCS7B02G373600.1.cds1, TraesCS7B02G373700.1.cds1, TraesCS7B02G373800.1, TraesCS7B02G373900.2, TraesCS7B02G374000.1.cds1, TraesCS7B02G374200.1, TraesCS7B02G375000.1, TraesCS7B02G375700.1.cds1, TraesCS7B02G375800.1.cds1, TraesCS7B02G376100.1.cds1, TraesCS7D02G395400.1, TraesCS7D02G458600.1.cds1, TraesCS7D02G459200.1.cds1, TraesCS7D02G459300.1.cds1, TraesCS7D02G459400.1.cds1, TraesCS7D02G459500.1.cds1, TraesCS7D02G459600.1, TraesCS7D02G459700.1.cds1, TraesCS7D02G459800.1.cds1, TraesCS7D02G460100.1.cds1, TraesCS7D02G461300.1.cds1
Poaceae Zea mays 8 Zm00001eb274280_P004, Zm00001eb274300_P001 ...
Zm00001eb274310_P001, Zm00001eb274320_P001, Zm00001eb305500_P001, Zm00001eb306050_P002, Zm00001eb389910_P001, Zm00001eb409490_P001
Poaceae Zoysia japonica 3 nbis-gene-40524, nbis-gene-40525, nbis-gene-43180
Poaceae Zoysia macrostachya 3 Zma_g29449, Zma_g33228, Zma_g33229
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