Basic Information
Locus ID:
gene-QYE76_036085
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 307084369 | 307085469 | - | gene-QYE76_036085 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 40,311.46 Da | 45.03 | 85.08 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 30 | 158 | 5.68981E-30 | IPR002083 |
| Pfam | PF00917 | MATH domain | 40 | 157 | 5.6E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 198 | 301 | 3.9E-19 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 26 | 164 | 8.34E-34 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 182 | 302 | 1.83E-23 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 186 | 302 | 4.2E-26 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 27 | 161 | 1.6E-31 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 303 | 365 | 2.4E-13 | - |
| SMART | SM00061 | math_3 | 33 | 140 | 2.2E-4 | IPR002083 |
| SMART | SM00225 | BTB_4 | 203 | 303 | 7.3E-16 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 28 | 157 | 22.845613 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 203 | 265 | 13.611801 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_051201610.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium perenne] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SM13 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0016360.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 16 | gene-QYE76_009217, gene-QYE76_027558, gene-QYE76_035563 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0500312, Pt_Chr0500313 |
| Poaceae | Thinopyrum elongatum | 3 | Tel1E01G151400, Tel2E01G837900, Tel3E01G112900 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC1AG010120, gene_TRIDC1AG010130 ... |
| Poaceae | Triticum aestivum | 15 | TraesCS1A02G072400.1.cds1, TraesCS1A02G072900.1.cds1 ... |