Basic Information
Locus ID:
gene-QYE76_036054
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins. Some of these proteins have been shown both in vivo and in vitro to have ubiquitin E3 ligase activity.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 305745906 | 305750112 | - | gene-QYE76_036054 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 53,658.11 Da | 65.36 | 83.39 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 239 | 287 | 2.12464E-15 | - |
| Pfam | PF12906 | RING-variant domain | 239 | 286 | 2.6E-11 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 235 | 290 | 2.93E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 226 | 294 | 9.5E-16 | IPR013083 |
| SMART | SM00744 | ringv_2 | 238 | 287 | 1.1E-17 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 231 | 293 | 19.141768 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 172 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 69 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60580.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_051198547.1 | uncharacterized protein LOC127312132 isoform X2 [Lolium perenne] | 0 |
| TrEMBL | I1GW50 | RING-CH-type domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g32600v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology