HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-QYE76_035886
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: F-box-like
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 300512615 300513462 + gene-QYE76_035886
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.02 27,828.12 Da 62.43 79.48 -0.22
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 14 51 1.1E-8 IPR001810
SUPERFAMILY SSF81383 F-box domain 14 61 1.44E-14 IPR036047
Gene3D G3DSA:1.20.1280.50 - 13 58 1.1E-9 -
SMART SM00256 fbox_2 15 54 2.1E-8 IPR001810
ProSiteProfiles PS50181 F-box domain profile. 9 61 10.239312 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G22710.1 F-box family protein. 0
RefSeq XP_020168213.1 putative F-box protein At1g47790 [Aegilops tauschii subsp. strangulata] 0
Swiss-Prot Q9LUJ0 Putative F-box protein At3g22710 OS=Arabidopsis thaliana OX=3702 GN=At3g22710 PE=4 SV=2 0
TrEMBL I1IKX3 F-box domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_4g15467v3 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Lolium multiflorum 7 gene-QYE76_017619, gene-QYE76_035670, gene-QYE76_035672 ...
gene-QYE76_035681, gene-QYE76_035885, gene-QYE76_035886, gene-QYE76_035887
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.