Basic Information
Locus ID:
gene-QYE76_035764
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Belongs to the DEAD box helicase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 296512194 | 296514023 | + | gene-QYE76_035764 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 46,684.88 Da | 46.06 | 91.48 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18787 | SF2_C_DEAD | 251 | 381 | 1.29698E-60 | - |
| CDD | cd17939 | DEADc_EIF4A | 42 | 240 | 3.76473E-136 | - |
| Pfam | PF00270 | DEAD/DEAH box helicase | 63 | 224 | 3.4E-40 | IPR011545 |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 264 | 372 | 1.5E-28 | IPR001650 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 107 | 392 | 8.56E-75 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 28 | 246 | 4.5E-67 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 247 | 411 | 5.9E-58 | IPR027417 |
| SMART | SM00487 | ultradead3 | 57 | 254 | 6.2E-58 | IPR014001 |
| SMART | SM00490 | helicmild6 | 291 | 372 | 4.1E-31 | IPR001650 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 250 | 411 | 25.95005 | IPR001650 |
| ProSiteProfiles | PS51195 | DEAD-box RNA helicase Q motif profile. | 38 | 66 | 10.920789 | IPR014014 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 69 | 239 | 29.415295 | IPR014001 |
| ProSitePatterns | PS00039 | DEAD-box subfamily ATP-dependent helicases signature. | 185 | 193 | - | IPR000629 |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13920.1 | eukaryotic translation initiation factor 4A1. eukaryotic translation initiation factor 4A-1 | 0 |
| RefSeq | XP_044437269.1 | eukaryotic initiation factor 4A [Triticum aestivum] | 0 |
| P41378 | Eukaryotic initiation factor 4A OS=Triticum aestivum OX=4565 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453SNN9 | Eukaryotic initiation factor 4A-11 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology