Basic Information
Locus ID:
gene-QYE76_035563
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 289953602 | 289954738 | + | gene-QYE76_035563 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.63 | 41,479.26 Da | 39.49 | 89.10 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 42 | 169 | 7.89428E-29 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 214 | 316 | 2.4E-19 | IPR000210 |
| Pfam | PF00917 | MATH domain | 64 | 164 | 3.6E-6 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 209 | 315 | 3.77E-19 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 40 | 170 | 1.46E-29 | - |
| Gene3D | G3DSA:6.10.250.3030 | - | 315 | 358 | 2.6E-9 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 41 | 171 | 5.3E-29 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 205 | 314 | 1.2E-22 | IPR011333 |
| SMART | SM00061 | math_3 | 46 | 150 | 2.0E-4 | IPR002083 |
| SMART | SM00225 | BTB_4 | 218 | 317 | 7.0E-15 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 41 | 168 | 22.973461 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 218 | 279 | 12.3502 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.1 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_051204017.1 | BTB/POZ and MATH domain-containing protein 3-like [Lolium perenne] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6Z0J0 | BTB domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0016360.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 16 | gene-QYE76_009217, gene-QYE76_027558, gene-QYE76_035563 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0500312, Pt_Chr0500313 |
| Poaceae | Thinopyrum elongatum | 3 | Tel1E01G151400, Tel2E01G837900, Tel3E01G112900 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC1AG010120, gene_TRIDC1AG010130 ... |
| Poaceae | Triticum aestivum | 15 | TraesCS1A02G072400.1.cds1, TraesCS1A02G072900.1.cds1 ... |