Basic Information
Locus ID:
gene-QYE76_035432
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Sugar (and other) transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 285424141 | 285437097 | - | gene-QYE76_035432 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 87,653.60 Da | 44.95 | 84.90 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 26 | 61 | 1.5E-9 | IPR001810 |
| Pfam | PF13963 | Transposase-associated domain | 667 | 738 | 3.8E-19 | IPR029480 |
| SUPERFAMILY | SSF81383 | F-box domain | 22 | 72 | 3.27E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 21 | 63 | 2.2E-9 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 575 | 677 | 3.3E-5 | IPR021109 |
| SMART | SM00256 | fbox_2 | 26 | 66 | 4.9E-10 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 119 | 323 | 5.1E-11 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 20 | 70 | 11.034144 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62660.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_051201709.1 | F-box protein At5g07610-like [Lolium perenne] | 0 |
| Q9LV12 | Putative F-box protein At5g62660 OS=Arabidopsis thaliana OX=3702 GN=At5g62660 PE=4 SV=1 | 0 | |
| TrEMBL | M8BEJ4 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_035428, gene-QYE76_035432, gene-QYE76_049662 |
| Poaceae | Oryza coarctata | 1 | Oco06G012710 |
| Poaceae | Oryza sativa | 2 | LOC_Os03g23040.1, LOC_Os05g14290.1 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0204291, Pt_Chr0204295, Pt_Chr0401115 |