Basic Information
Locus ID:
gene-QYE76_035428
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 285337579 | 285338769 | + | gene-QYE76_035428 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 43,840.30 Da | 42.01 | 90.86 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 15 | 55 | 1.3E-11 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 232 | 335 | 9.8E-7 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 60 | 1.23E-15 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 9 | 64 | 1.7E-10 | - |
| SMART | SM00256 | fbox_2 | 15 | 55 | 1.3E-10 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 107 | 348 | 6.6E-13 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 55 | 11.564033 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49610.1 | F-box family protein. | 0 |
| RefSeq | XP_051201708.1 | F-box protein At5g49610-like [Lolium perenne] | 0 |
| Q9FGY4 | F-box protein At5g49610 OS=Arabidopsis thaliana OX=3702 GN=At5g49610 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7DWD3 | F-box domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_4G078900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_035428, gene-QYE76_035432, gene-QYE76_049662 |
| Poaceae | Oryza coarctata | 1 | Oco06G012710 |
| Poaceae | Oryza sativa | 2 | LOC_Os03g23040.1, LOC_Os05g14290.1 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0204291, Pt_Chr0204295, Pt_Chr0401115 |