Basic Information
Locus ID:
gene-QYE76_034265
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
CRAL/TRIO domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 245299015 | 245317567 | + | gene-QYE76_034265 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.69 | 177,901.95 Da | 52.35 | 80.70 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01650 | RT_nLTR_like | 309 | 570 | 5.30341E-52 | - |
| Pfam | PF13966 | zinc-binding in reverse transcriptase | 814 | 860 | 3.2E-8 | IPR026960 |
| Pfam | PF03094 | Mlo family | 172 | 267 | 2.5E-14 | IPR004326 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 315 | 569 | 3.1E-36 | IPR000477 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 322 | 590 | 7.41E-14 | IPR043502 |
| ProSiteProfiles | PS50878 | Reverse transcriptase (RT) catalytic domain profile. | 295 | 570 | 11.274 | IPR000477 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1378 | 1422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1349 | 1363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1298 | 1319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1343 | 1537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1485 | 1507 | - | - |
Gene Ontology
Biological Process:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02600.1 | Seven transmembrane MLO family protein. A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). | 0 |
| RefSeq | XP_040249279.1 | uncharacterized protein LOC120966801 [Aegilops tauschii subsp. strangulata] | 0 |
| O49621 | MLO-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=MLO1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453B5Y2 | Reverse transcriptase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology