Basic Information
Locus ID:
gene-QYE76_034061
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 237292161 | 237294855 | - | gene-QYE76_034061 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.89 | 77,016.66 Da | 72.16 | 61.98 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 135 | 178 | 3.73188E-20 | - |
| Pfam | PF13639 | Ring finger domain | 135 | 178 | 2.5E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 130 | 184 | 1.67E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 111 | 186 | 3.0E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 136 | 177 | 1.9E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 136 | 178 | 11.441815 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 450 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 572 | 589 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 458 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 572 | 636 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 350 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42350.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_051229700.1 | uncharacterized protein LOC127347573 [Lolium perenne] | 0 |
| Q9SLC4 | RING-H2 finger protein ATL40 OS=Arabidopsis thaliana OX=3702 GN=ATL40 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6YID8 | RING-type domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 16 | gene-QYE76_005466, gene-QYE76_005873, gene-QYE76_007046 ... |