Basic Information
Locus ID:
gene-QYE76_033626
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 223003658 | 223007142 | + | gene-QYE76_033626 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.08 | 53,206.00 Da | 45.16 | 87.75 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00139 | Legume lectin domain | 3 | 151 | 6.0E-29 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 2 | 150 | 8.98E-31 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 1 | 154 | 4.3E-35 | - |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 28 | 34 | - | IPR019825 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048556699.1 | uncharacterized protein LOC125537428 [Triticum urartu] | 0 |
| P81371 | Seed lectin OS=Vatairea macrocarpa OX=77050 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453L3Y4 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | BH02.4399, CH02.4447, CH04.698 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1AG0044910, gene-QOZ80_6BG0472060 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0103660.1, HORVU.MOREX.r3.3HG0325350.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_033622, gene-QYE76_033626, gene-QYE76_038280 ... |
| Poaceae | Oryza sativa | 1 | LOC_Os08g24670.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G182600 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr02G033140, Chr05G000710 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G130100, Tel2E01G132800 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC2AG006430 |
| Poaceae | Triticum aestivum | 8 | TraesCS2A02G055200.1, TraesCS2A02G057000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb142870_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-52831 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g26408 |