Basic Information
Locus ID:
gene-QYE76_032966
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Transposase-associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 198511516 | 198514747 | + | gene-QYE76_032966 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.92 | 45,658.39 Da | 53.49 | 60.00 | -0.98 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02992 | Transposase family tnp2 | 197 | 237 | 1.9E-12 | IPR004242 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 49 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051190813.1 | uncharacterized protein LOC127304151 [Lolium perenne] | 0 |
| TrEMBL | A0A8J5TKY2 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0014g46908 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 30 | gene-QYE76_001210, gene-QYE76_002996, gene-QYE76_004554 ... |