HalophFGD

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Basic Information
Locus ID: gene-QYE76_032481
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 180376293 180378790 + gene-QYE76_032481
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.20 64,457.90 Da 59.40 68.01 -0.77
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 41 78 5.6E-6 IPR001810
SUPERFAMILY SSF52058 L domain-like 101 510 6.12E-6 -
SUPERFAMILY SSF81383 F-box domain 33 109 8.63E-12 IPR036047
Gene3D G3DSA:1.20.1280.50 - 39 82 7.9E-7 -
SMART SM00256 fbox_2 45 84 0.0071 IPR001810
ProSiteProfiles PS50181 F-box domain profile. 39 75 9.232525 IPR001810
MobiDBLite mobidb-lite consensus disorder prediction 300 338 - -
MobiDBLite mobidb-lite consensus disorder prediction 357 418 - -
MobiDBLite mobidb-lite consensus disorder prediction 279 418 - -
MobiDBLite mobidb-lite consensus disorder prediction 556 587 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 38 - -
MobiDBLite mobidb-lite consensus disorder prediction 339 356 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G02700.1 F-box/RNI-like superfamily protein. 0
RefSeq XP_047096155.1 uncharacterized protein LOC124708514 [Lolium rigidum] 0
Swiss-Prot Q9LZ15 Putative F-box/LRR-repeat protein At5g02700 OS=Arabidopsis thaliana OX=3702 GN=At5g02700 PE=4 SV=1 0
TrEMBL A0A3B6SLL7 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 12 AH05.1153, AH07.1109, AH07.694, AH08.586, AH08.591, AH08.592 ...
AH08.593, AH08.594, BH07.824, BH08.639, CH05.1355, CH08.730
Poaceae Eleusine coracana subsp. coracana 11 gene-QOZ80_8AG0620710, gene-QOZ80_8AG0620730 ...
gene-QOZ80_8AG0620740, gene-QOZ80_8AG0620780, gene-QOZ80_8AG0620800, gene-QOZ80_8AG0620870, gene-QOZ80_8BG0652330, gene-QOZ80_8BG0652400, gene-QOZ80_8BG0652420, gene-QOZ80_8BG0652480, gene-QOZ80_9AG0685400
Poaceae Hordeum vulgare 8 HORVU.MOREX.r3.1HG0038960.1, HORVU.MOREX.r3.1HG0038990.1 ...
HORVU.MOREX.r3.1HG0038980.1.CDS1, HORVU.MOREX.r3.2HG0213510.1, HORVU.MOREX.r3.5HG0534780.1, HORVU.MOREX.r3.7HG0648190.1, HORVU.MOREX.r3.7HG0649320.1, HORVU.MOREX.r3.7HG0701270.1
Poaceae Lolium multiflorum 16 gene-QYE76_008238, gene-QYE76_032254, gene-QYE76_032481 ...
gene-QYE76_038981, gene-QYE76_038983, gene-QYE76_038986, gene-QYE76_038987, gene-QYE76_040192, gene-QYE76_040193, gene-QYE76_040331, gene-QYE76_040547, gene-QYE76_040550, gene-QYE76_040551, gene-QYE76_040553, gene-QYE76_067650, gene-QYE76_067653
Poaceae Oryza coarctata 9 Oco15G003840, Oco15G003850, Oco15G005330, Oco16G003710 ...
Oco16G003720, Oco16G003730, Oco16G003740, Oco16G005080, Oco16G007060
Poaceae Oryza sativa 13 LOC_Os02g09580.1, LOC_Os08g09710.1, LOC_Os08g09715.1 ...
LOC_Os08g09720.1, LOC_Os08g09730.1, LOC_Os08g09740.1, LOC_Os08g09750.1, LOC_Os08g09760.1, LOC_Os08g09780.1, LOC_Os08g09790.1, LOC_Os08g09910.1, LOC_Os08g09920.1, LOC_Os08g16860.1
Poaceae Paspalum vaginatum 4 gene-BS78_07G078200, gene-BS78_07G078300 ...
gene-BS78_07G078400, gene-BS78_07G078600
Poaceae Puccinellia tenuiflora 10 Pt_Chr0205856, Pt_Chr0304499, Pt_Chr0304500, Pt_Chr0304577 ...
Pt_Chr0502200, Pt_Chr0504563, Pt_Chr0700135, Pt_Chr0700139, Pt_Chr0704764, Pt_Chr0704894
Poaceae Sporobolus alterniflorus 10 Chr20G010380, Chr20G010390, Chr20G010400, Chr20G010410 ...
Chr20G010420, Chr29G009990, Chr29G010000, Chr29G010010, Chr29G010020, Chr29G010030
Poaceae Thinopyrum elongatum 10 Tel2E01G257500, Tel2E01G257800, Tel2E01G976600 ...
Tel2E01G976800, Tel5E01G013500, Tel5E01G853000, Tel5E01G856600, Tel7E01G177300, Tel7E01G189500, Tel7E01G647600
Poaceae Triticum dicoccoides 23 gene_TRIDC2AG014810, gene_TRIDC2AG014820 ...
gene_TRIDC2AG014830, gene_TRIDC2AG014850, gene_TRIDC2AG014870, gene_TRIDC2AG015020, gene_TRIDC2AG015030, gene_TRIDC2AG025260, gene_TRIDC2AG078790, gene_TRIDC2BG017850, gene_TRIDC2BG017870, gene_TRIDC2BG017890, gene_TRIDC2BG017910, gene_TRIDC2BG017920, gene_TRIDC2BG018010, gene_TRIDC2BG086990, gene_TRIDC3AG074950, gene_TRIDC4AG049810, gene_TRIDC4AG058130, gene_TRIDC4AG059410, gene_TRIDC7AG010440, gene_TRIDC7AG042620, gene_TRIDC7BG033780
Poaceae Triticum aestivum 51 TraesCS2A02G121400.1, TraesCS2A02G121500.1 ...
TraesCS2A02G121600.1, TraesCS2A02G121700.1, TraesCS2A02G196300.1, TraesCS2B02G142100.1, TraesCS2B02G142200.1, TraesCS2B02G142400.1, TraesCS2B02G142500.1, TraesCS2B02G142800.1, TraesCS2B02G142900.1, TraesCS2B02G143100.1, TraesCS2B02G143200.1, TraesCS2B02G598900.1, TraesCS2B02G599100.1, TraesCS2B02G599200.1, TraesCS2D02G123500.1, TraesCS2D02G123600.1, TraesCS2D02G124100.1, TraesCS2D02G124200.1, TraesCS2D02G593600.1, TraesCS2D02G593800.1, TraesCS3B02G598300.1, TraesCS3B02G599000.1, TraesCS4A02G329700.1, TraesCS4A02G329900.1, TraesCS4A02G390700.1, TraesCS4B02G025000.1, TraesCS4B02G025100.2, TraesCS5A02G005000.1, TraesCS5A02G005700.1, TraesCS5D02G006900.1, TraesCS5D02G011700.1, TraesCS5D02G543200.1, TraesCS7A02G090800.1, TraesCS7B02G205700.1, TraesCS7B02G284600.1, TraesCS7D02G079300.1, TraesCS7D02G086100.1, TraesCS7D02G302100.1, TraesCS7D02G378600.1, TraesCSU02G037100.1, TraesCSU02G037300.1, TraesCSU02G037400.1, TraesCSU02G163000.1.cds1, TraesCSU02G163100.2, TraesCSU02G174600.1, TraesCSU02G180300.1, TraesCSU02G180700.1, TraesCSU02G192600.1, TraesCSU02G248900.1.cds1
Poaceae Zea mays 1 Zm00001eb171210_P002
Poaceae Zoysia japonica 5 nbis-gene-23586, nbis-gene-23587, nbis-gene-48563 ...
nbis-gene-51333, nbis-gene-51334
Poaceae Zoysia macrostachya 2 Zma_g22619, Zma_g26540
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.