Basic Information
Locus ID:
gene-QYE76_032455
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 179806738 | 179813016 | + | gene-QYE76_032455 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.90 | 39,048.33 Da | 43.45 | 90.64 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 19 | 143 | 1.0116E-17 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 174 | 280 | 6.2E-24 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 161 | 279 | 2.63E-27 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 18 | 149 | 1.96E-24 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 152 | 284 | 5.7E-35 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 15 | 148 | 1.2E-21 | IPR008974 |
| SMART | SM00225 | BTB_4 | 182 | 287 | 4.9E-19 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 16 | 143 | 13.742872 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 182 | 243 | 16.445236 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_047075010.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium rigidum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | N1QXM4 | Speckle-type POZ protein-like protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_032455 |
| Poaceae | Oryza coarctata | 1 | Oco15G004500 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G958600 |
| Poaceae | Triticum aestivum | 2 | TraesCS7A02G550800.1.cds1, TraesCS7D02G537000.1.cds1 |