Basic Information
Locus ID:
gene-QYE76_032398
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 177877034 | 177885207 | + | gene-QYE76_032398 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 87,917.30 Da | 41.54 | 72.71 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 69 | 204 | 1.7E-18 | - |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 255 | 291 | 9.21E-5 | IPR036875 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 666 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 656 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_022683499.1 | uncharacterized protein LOC111257721 [Setaria italica] | 0 |
| TrEMBL | A0A453M270 | CCHC-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 10 | gene-QYE76_011631, gene-QYE76_011773, gene-QYE76_014559 ... |