Basic Information
Locus ID:
gene-QYE76_032308
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ankyrin repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 174418572 | 174431649 | - | gene-QYE76_032308 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 76,441.59 Da | 46.77 | 84.68 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 539 | 588 | 2.7085E-4 | - |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 306 | 426 | 1.0E-13 | IPR020683 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 441 | 485 | 2.4E-6 | IPR020683 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 238 | 299 | 8.7E-7 | IPR020683 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 238 | 497 | 4.81E-50 | IPR036770 |
| SUPERFAMILY | SSF57850 | RING/U-box | 535 | 595 | 1.02E-7 | - |
| Gene3D | G3DSA:1.25.40.20 | - | 228 | 381 | 1.8E-30 | IPR036770 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 527 | 607 | 5.1E-7 | IPR013083 |
| Gene3D | G3DSA:1.25.40.20 | - | 382 | 499 | 3.6E-24 | IPR036770 |
| SMART | SM00248 | ANK_2a | 301 | 330 | 0.016 | IPR002110 |
| SMART | SM00248 | ANK_2a | 441 | 470 | 2.8E-4 | IPR002110 |
| SMART | SM00184 | ring_2 | 539 | 588 | 8.0E-5 | IPR001841 |
| SMART | SM00248 | ANK_2a | 335 | 365 | 1.8 | IPR002110 |
| SMART | SM00248 | ANK_2a | 268 | 297 | 2.2E-5 | IPR002110 |
| SMART | SM00248 | ANK_2a | 398 | 427 | 1.2E-4 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 441 | 472 | 10.895672 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 301 | 333 | 9.24383 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 398 | 430 | 12.23535 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 335 | 356 | 8.68292 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 268 | 299 | 12.116116 | - |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 539 | 589 | 10.379599 | IPR001841 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 441 | 473 | 12.1018 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 268 | 300 | 12.9031 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 335 | 356 | 8.667035 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 398 | 426 | 11.82427 | - |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 554 | 563 | - | IPR017907 |
| PRINTS | PR01415 | Ankyrin repeat signature | 399 | 414 | 3.5E-5 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 457 | 471 | 3.5E-5 | IPR002110 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57740.1 | XB3 ortholog 2 in Arabidopsis thaliana. ubiquitin ligase | 0 |
| RefSeq | XP_047073373.1 | probable E3 ubiquitin-protein ligase XBOS35 [Lolium rigidum] | 0 |
| Q7EZ44 | Probable E3 ubiquitin-protein ligase XBOS35 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS35 PE=2 SV=1 | 0 | |
| TrEMBL | I1I2D0 | RING-type domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100831868 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology