Basic Information
Locus ID:
gene-QYE76_032299
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ankyrin repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 174056726 | 174083063 | + | gene-QYE76_032299 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 131,394.13 Da | 47.70 | 83.38 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 1019 | 1068 | 2.22718E-5 | - |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 786 | 906 | 2.1E-13 | IPR020683 |
| Pfam | PF00023 | Ankyrin repeat | 922 | 947 | 3.6E-4 | IPR002110 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 718 | 779 | 1.8E-6 | IPR020683 |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 85 | 205 | 4.9E-40 | IPR013103 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 718 | 977 | 1.31E-49 | IPR036770 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1015 | 1075 | 2.75E-7 | - |
| Gene3D | G3DSA:1.25.40.20 | - | 864 | 979 | 7.6E-24 | IPR036770 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1007 | 1087 | 9.9E-7 | IPR013083 |
| Gene3D | G3DSA:1.25.40.20 | - | 708 | 863 | 3.8E-30 | IPR036770 |
| SMART | SM00184 | ring_2 | 1019 | 1068 | 8.0E-5 | IPR001841 |
| SMART | SM00248 | ANK_2a | 878 | 907 | 1.2E-4 | IPR002110 |
| SMART | SM00248 | ANK_2a | 921 | 950 | 2.8E-4 | IPR002110 |
| SMART | SM00248 | ANK_2a | 748 | 777 | 2.2E-5 | IPR002110 |
| SMART | SM00248 | ANK_2a | 815 | 845 | 1.8 | IPR002110 |
| SMART | SM00248 | ANK_2a | 781 | 810 | 0.016 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 921 | 953 | 12.1018 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 748 | 779 | 12.116116 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 815 | 836 | 8.667035 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 815 | 836 | 8.68292 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 781 | 813 | 9.24383 | IPR002110 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1019 | 1069 | 10.379599 | IPR001841 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 878 | 906 | 11.82427 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 748 | 780 | 12.9031 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 878 | 910 | 12.23535 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 921 | 952 | 10.895672 | - |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 1034 | 1043 | - | IPR017907 |
| PRINTS | PR01415 | Ankyrin repeat signature | 879 | 894 | 9.2E-5 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 937 | 951 | 9.2E-5 | IPR002110 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57740.1 | XB3 ortholog 2 in Arabidopsis thaliana. ubiquitin ligase | 0 |
| RefSeq | XP_047073373.1 | probable E3 ubiquitin-protein ligase XBOS35 [Lolium rigidum] | 0 |
| Q7EZ44 | Probable E3 ubiquitin-protein ligase XBOS35 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS35 PE=2 SV=1 | 0 | |
| TrEMBL | I1I2D0 | RING-type domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100831868 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology