Basic Information
Locus ID:
gene-QYE76_032119
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Retrotransposon gag protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 165439616 | 165445895 | + | gene-QYE76_032119 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.21 | 79,910.64 Da | 37.82 | 75.43 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 609 | 642 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 340 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 687 | 713 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 696 | 713 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| Coils | Coil | Coil | 198 | 222 | - | - |
| Coils | Coil | Coil | 71 | 108 | - | - |
| Coils | Coil | Coil | 146 | 166 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048556572.1 | uncharacterized protein LOC125537321 [Triticum urartu] | 0 |
| TrEMBL | A0A8I6WD45 | CCHC-type domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 33 | gene-QYE76_000029, gene-QYE76_000961, gene-QYE76_010060 ... |