Basic Information
Locus ID:
gene-QYE76_032047
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Reverse transcriptase (RNA-dependent DNA polymerase)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 162406290 | 162414635 | - | gene-QYE76_032047 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 75,274.46 Da | 44.37 | 63.82 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13963 | Transposase-associated domain | 79 | 136 | 1.2E-8 | IPR029480 |
| Pfam | PF02992 | Transposase family tnp2 | 384 | 455 | 1.0E-28 | IPR004242 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 586 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 541 | 555 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051211685.1 | uncharacterized protein LOC127329186 [Lolium perenne] | 0 |
| TrEMBL | Q2RAX4 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os11g03960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 35 | gene-QYE76_002238, gene-QYE76_002580, gene-QYE76_006006 ... |