Basic Information
Locus ID:
gene-QYE76_031869
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
UBP2
Description:
Ubiquitinyl hydrolase 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 155185407 | 155191150 | - | gene-QYE76_031869 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 131,426.83 Da | 38.26 | 80.48 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02667 | Peptidase_C19K | 421 | 770 | 2.04174E-58 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 421 | 769 | 1.8E-38 | IPR001394 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 183 | 317 | 7.2E-10 | IPR001394 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 820 | 899 | 3.19E-6 | IPR029071 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 179 | 282 | 1.3E-15 | IPR038765 |
| SUPERFAMILY | SSF57850 | RING/U-box | 20 | 84 | 2.12E-5 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 419 | 771 | 9.81E-67 | IPR038765 |
| Gene3D | G3DSA:3.10.20.90 | - | 822 | 902 | 1.4E-5 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 167 | 339 | 1.8E-14 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 417 | 779 | 2.3E-66 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 420 | 772 | 38.000374 | IPR028889 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 13 | 90 | 11.614498 | IPR001607 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 824 | 899 | 10.767145 | IPR000626 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 421 | 436 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 714 | 732 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 183 | 198 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 633 | 654 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 628 | 658 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04860.1 | ubiquitin-specific protease 2. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_047057610.1 | ubiquitin carboxyl-terminal hydrolase 2-like [Lolium rigidum] | 0 |
| Q8W4N3 | Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=UBP2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6TE39 | USP domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology