Basic Information
Locus ID:
gene-QYE76_031418
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 136031009 | 136037612 | + | gene-QYE76_031418 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 94,067.77 Da | 51.38 | 80.51 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 120 | 210 | 1.1E-8 | IPR005162 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 558 | 598 | 1.08E-6 | IPR043502 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 376 | 493 | 1.4E-5 | IPR021109 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 539 | 654 | 4.5E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 62 | - | - |
| Coils | Coil | Coil | 705 | 725 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051211378.1 | uncharacterized protein LOC127328846 [Lolium perenne] | 0 |
| TrEMBL | A0A8S0Q5E1 | BI2L2 protein OS=Olea europaea subsp. europaea OX=158383 GN=OLEA9_A074650 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |