halophFGD

Basic Information

Locus ID: gene-QYE76_031125

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: Plant mobile domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	123429549	123435245	+	gene-QYE76_031125

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.34	168,498.22 Da	49.18	63.64	-0.65

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF10536	Plant mobile domain	805	1144	4.2E-51	IPR019557
Pfam	PF03108	MuDR family transposase	215	278	2.4E-8	IPR004332
SUPERFAMILY	SSF57756	Retrovirus zinc finger-like domains	689	716	2.88E-5	IPR036875
SMART	SM00575	26again6	596	623	8.6E-6	IPR006564
ProSiteProfiles	PS50966	Zinc finger SWIM-type profile.	584	621	9.247813	IPR007527
MobiDBLite	mobidb-lite	consensus disorder prediction	154	192	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	108	129	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1441	1487	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	154	181	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1469	1487	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1318	1343	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1400	1420	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1303	1317	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1282	1367	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1393	1420	-	-

Gene Ontology

Molecular Function:

Best hit

Source	Best Hit ID	Description
TAIR	AT1G48120.1	hydrolases;protein serine/threonine phosphatases.
RefSeq	XP_051203757.1	serine/threonine-protein phosphatase 7 long form homolog [Lolium perenne]
Swiss-Prot	Q9LNG5	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1
TrEMBL	Q7XVD8	OSJNBb0042I07.13 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0042I07.13 PE=4 SV=2

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	40	gene-QYE76_003106, gene-QYE76_004905, gene-QYE76_007129 ... gene-QYE76_007459, gene-QYE76_007460, gene-QYE76_007678, gene-QYE76_008699, gene-QYE76_009652, gene-QYE76_010827, gene-QYE76_011172, gene-QYE76_016027, gene-QYE76_017898, gene-QYE76_024787, gene-QYE76_026183, gene-QYE76_031125, gene-QYE76_031920, gene-QYE76_031925, gene-QYE76_032983, gene-QYE76_034251, gene-QYE76_035075, gene-QYE76_036400, gene-QYE76_037581, gene-QYE76_037987, gene-QYE76_037998, gene-QYE76_037999, gene-QYE76_040991, gene-QYE76_041373, gene-QYE76_041718, gene-QYE76_045280, gene-QYE76_047443, gene-QYE76_049160, gene-QYE76_051154, gene-QYE76_054532, gene-QYE76_058190, gene-QYE76_059907, gene-QYE76_060651, gene-QYE76_062629, gene-QYE76_067714, gene-QYE76_069777, gene-QYE76_071208
Poaceae	Oryza coarctata	1	Oco04G018420
Poaceae	Triticum dicoccoides	1	gene_TRIDC5BG047900