Basic Information
Locus ID:
gene-QYE76_031108
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 122653035 | 122660508 | + | gene-QYE76_031108 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 107,138.32 Da | 55.73 | 63.85 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02661 | Peptidase_C19E | 439 | 741 | 3.94913E-130 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 438 | 740 | 5.6E-47 | IPR001394 |
| Pfam | PF01753 | MYND finger | 114 | 151 | 3.8E-9 | IPR002893 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 434 | 745 | 1.2E-85 | IPR038765 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 109 | 153 | 6.1E-12 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 106 | 153 | 1.4E-11 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 431 | 754 | 7.3E-93 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 438 | 743 | 51.976749 | IPR028889 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 114 | 151 | 11.542172 | IPR002893 |
| ProSitePatterns | PS01360 | Zinc finger MYND-type signature. | 114 | 151 | - | IPR002893 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 439 | 454 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 882 | 900 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 928 | 945 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 949 | 965 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 803 | 852 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 818 | 852 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 762 | 786 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 879 | 901 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 928 | 976 | - | - |
| Coils | Coil | Coil | 30 | 57 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65450.1 | ubiquitin-specific protease 17. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_047060924.1 | ubiquitin carboxyl-terminal hydrolase 19-like [Lolium rigidum] | 0 |
| Q9FKP5 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana OX=3702 GN=UBP17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7R3I1 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology