Basic Information
Locus ID:
gene-QYE76_030995
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Cytosine-specific methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 118227067 | 118232795 | - | gene-QYE76_030995 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 99,503.23 Da | 36.24 | 73.66 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04716 | BAH_plantDCM_I | 189 | 314 | 1.25487E-54 | - |
| CDD | cd18635 | CD_CMT3_like | 437 | 491 | 2.73465E-28 | - |
| Pfam | PF00385 | Chromo (CHRromatin Organisation MOdifier) domain | 438 | 491 | 2.6E-12 | IPR023780 |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 495 | 862 | 2.0E-34 | IPR001525 |
| Pfam | PF01426 | BAH domain | 191 | 312 | 1.5E-13 | IPR001025 |
| SUPERFAMILY | SSF54160 | Chromo domain-like | 420 | 500 | 1.3E-17 | IPR016197 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 337 | 862 | 6.89E-78 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 339 | 880 | 7.2E-262 | - |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 654 | 828 | 7.2E-262 | - |
| Gene3D | G3DSA:2.30.30.490 | - | 136 | 298 | 2.0E-50 | IPR043151 |
| SMART | SM00439 | BAH_4 | 190 | 313 | 1.4E-21 | IPR001025 |
| SMART | SM00298 | chromo_7 | 437 | 494 | 2.1E-12 | IPR000953 |
| TIGRFAM | TIGR00675 | dcm: DNA (cytosine-5-)-methyltransferase | 503 | 859 | 1.4E-29 | IPR001525 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 190 | 313 | 19.336107 | IPR001025 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 337 | 869 | 45.284542 | IPR001525 |
| ProSiteProfiles | PS50013 | Chromo and chromo shadow domain profile. | 438 | 492 | 14.783801 | IPR000953 |
| ProSitePatterns | PS00094 | C-5 cytosine-specific DNA methylases active site. | 506 | 518 | - | IPR018117 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 549 | 563 | 1.8E-12 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 595 | 608 | 1.8E-12 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 338 | 354 | 1.8E-12 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 68 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 53 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69770.1 | chromomethylase 3. Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing. | 0 |
| RefSeq | XP_047046544.1 | DNA (cytosine-5)-methyltransferase 1-like [Lolium rigidum] | 0 |
| Q9AXT8 | DNA (cytosine-5)-methyltransferase 1 OS=Zea mays OX=4577 GN=MET2A PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NWB1 | DNA (cytosine-5-)-methyltransferase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology