Basic Information
Locus ID:
gene-QYE76_030935
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Prokaryotic RING finger family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 116535987 | 116536448 | + | gene-QYE76_030935 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 16,624.08 Da | 61.62 | 89.35 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 91 | 134 | 4.83084E-16 | - |
| Pfam | PF13639 | Ring finger domain | 91 | 134 | 4.5E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 91 | 141 | 1.37E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 84 | 147 | 4.6E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 92 | 133 | 9.9E-7 | IPR001841 |
| SMART | SM00744 | ringv_2 | 91 | 134 | 1.0E-4 | IPR011016 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 92 | 134 | 13.212175 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04240.1 | RING/U-box superfamily protein. Encodes a small protein with an N-terminal trans-membrane domain and a RING-H2 zinc finger motif located at the C-terminus. Gene expression is induced by salt and osmotic stress. Transcrips levels are induced by DELLA proteins and repressed by gibberellic acid. Involved in ABA metabolism. | 0 |
| RefSeq | XP_047072762.1 | probable E3 ubiquitin-protein ligase XERICO [Lolium rigidum] | 0 |
| Q9SI09 | Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=XERICO PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J5VKD9 | RING-type domain-containing protein OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0008g13027 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology