HalophFGD

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Basic Information
Locus ID: gene-QYE76_030931
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 116464211 116465389 - gene-QYE76_030931
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.94 44,502.64 Da 64.72 84.82 -0.13
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 19 51 2.5E-9 IPR001810
SUPERFAMILY SSF81383 F-box domain 15 68 8.11E-11 IPR036047
Gene3D G3DSA:1.20.1280.50 - 13 62 1.7E-6 -
SMART SM00256 fbox_2 15 55 1.7E-4 IPR001810
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 100 327 9.1E-29 IPR017451
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G52320.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_047072752.1 F-box protein At3g07870-like [Lolium rigidum] 0
Swiss-Prot Q9FT50 Putative F-box protein At3g52320 OS=Arabidopsis thaliana OX=3702 GN=At3g52320 PE=4 SV=1 0
TrEMBL A0A835BL42 F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_037872 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH03.2319, AH06.87, BH03.2454, CH03.2648, CH03.2649, CH06.82 ...
CH03.2651
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_6AG0533780, gene-QOZ80_6AG0538870 ...
gene-QOZ80_6AG0538880, gene-QOZ80_6AG0538890, gene-QOZ80_6BG0492150, gene-QOZ80_6BG0492160, gene-QOZ80_6BG0492210
Poaceae Hordeum vulgare 4 HORVU.MOREX.r3.2HG0195230.1.CDS1 ...
HORVU.MOREX.r3.5HG0477220.1.CDS1, HORVU.MOREX.r3.5HG0489060.1.CDS1, HORVU.MOREX.r3.5HG0489110.1
Poaceae Lolium multiflorum 13 gene-QYE76_003498, gene-QYE76_004274, gene-QYE76_004797 ...
gene-QYE76_005988, gene-QYE76_005991, gene-QYE76_005995, gene-QYE76_005996, gene-QYE76_006035, gene-QYE76_006036, gene-QYE76_006039, gene-QYE76_006364, gene-QYE76_006492, gene-QYE76_030931
Poaceae Oryza coarctata 4 Oco17G003620, Oco17G007470, Oco17G009530, Oco18G003640
Poaceae Oryza sativa 4 LOC_Os09g20650.1, LOC_Os09g30170.1, LOC_Os09g30180.1 ...
LOC_Os09g34200.1
Poaceae Paspalum vaginatum 2 gene-BS78_02G167800, gene-BS78_02G217500
Poaceae Puccinellia tenuiflora 9 Pt_Chr0701658, Pt_Chr0701661, Pt_Chr0701662, Pt_Chr0701663 ...
Pt_Chr0701693, Pt_Chr0701696, Pt_Chr0701697, Pt_Chr0701699, Pt_Chr0702428
Poaceae Sporobolus alterniflorus 13 Chr0G015190, Chr0G015200, Chr10G007830, Chr10G007840 ...
Chr10G007850, Chr10G011140, Chr11G011130, Chr11G011290, Chr14G015880, Chr14G015890, Chr21G012180, Chr21G014920, Chr21G014930
Poaceae Thinopyrum elongatum 7 Tel5E01G330000, Tel5E01G406100, Tel5E01G406200 ...
Tel5E01G406300, Tel5E01G406400, Tel5E01G406600, Tel5E01G414700
Poaceae Triticum dicoccoides 18 gene_TRIDC5AG031850, gene_TRIDC5AG039550 ...
gene_TRIDC5AG039570, gene_TRIDC5AG039600, gene_TRIDC5AG039610, gene_TRIDC5AG039620, gene_TRIDC5AG039650, gene_TRIDC5AG039660, gene_TRIDC5AG039670, gene_TRIDC5BG033480, gene_TRIDC5BG042010, gene_TRIDC5BG042020, gene_TRIDC5BG042040, gene_TRIDC5BG042050, gene_TRIDC5BG042070, gene_TRIDC5BG042080, gene_TRIDC5BG042120, gene_TRIDC5BG042130
Poaceae Triticum aestivum 33 TraesCS2B02G484400.1, TraesCS2D02G463300.1 ...
TraesCS5A02G188400.1.cds1, TraesCS5A02G253800.1.cds1, TraesCS5A02G253900.2, TraesCS5A02G254000.1, TraesCS5A02G254100.1, TraesCS5A02G254200.2, TraesCS5A02G254300.1, TraesCS5A02G254400.1, TraesCS5A02G254500.1, TraesCS5B02G195200.1.cds1, TraesCS5B02G252700.1.cds1, TraesCS5B02G252800.2, TraesCS5B02G252900.3, TraesCS5B02G253000.1, TraesCS5B02G253100.1, TraesCS5B02G253200.3, TraesCS5B02G253300.3, TraesCS5B02G253400.1, TraesCS5B02G253500.2, TraesCS5B02G253600.1, TraesCS5D02G202600.1.cds1, TraesCS5D02G261400.1.cds1, TraesCS5D02G261500.1, TraesCS5D02G261600.4, TraesCS5D02G261700.1, TraesCS5D02G261800.1, TraesCS5D02G261900.3, TraesCS5D02G262000.1.cds1, TraesCS5D02G262100.2, TraesCS5D02G262200.1, TraesCS5D02G262300.1
Poaceae Zea mays 2 Zm00001eb101520_P001, Zm00001eb311420_P001
Poaceae Zoysia japonica 4 nbis-gene-19550, nbis-gene-19552, nbis-gene-19553 ...
nbis-gene-30501
Poaceae Zoysia macrostachya 5 Zma_g30238, Zma_g30509, Zma_g32489, Zma_g32745, Zma_g32746
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.