Basic Information
Locus ID:
gene-QYE76_030581
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Cupin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 104193952 | 104219004 | + | gene-QYE76_030581 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.63 | 65,764.84 Da | 31.30 | 90.74 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03201 | GST_C_DHAR | 90 | 210 | 8.35153E-72 | - |
| CDD | cd00570 | GST_N_family | 20 | 82 | 5.85275E-15 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 450 | 604 | 6.34647E-75 | - |
| CDD | cd02242 | cupin_11S_legumin_N | 253 | 423 | 2.98835E-57 | - |
| Pfam | PF00190 | Cupin | 444 | 590 | 2.8E-23 | IPR006045 |
| Pfam | PF00190 | Cupin | 258 | 405 | 9.8E-24 | IPR006045 |
| Pfam | PF13417 | Glutathione S-transferase, N-terminal domain | 19 | 88 | 1.5E-16 | IPR004045 |
| SUPERFAMILY | SSF47616 | GST C-terminal domain-like | 84 | 210 | 1.12E-23 | IPR036282 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 19 | 89 | 1.16E-18 | IPR036249 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 250 | 596 | 1.26E-48 | IPR011051 |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 1 | 90 | 5.2E-32 | - |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 269 | 431 | 2.0E-28 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 446 | 607 | 6.0E-50 | IPR014710 |
| Gene3D | G3DSA:1.20.1050.10 | - | 91 | 212 | 4.2E-47 | - |
| SMART | SM00835 | Cupin_1_3 | 252 | 409 | 2.5E-31 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 447 | 591 | 1.6E-19 | IPR006045 |
| ProSiteProfiles | PS50405 | Soluble glutathione S-transferase C-terminal domain profile. | 67 | 207 | 9.662613 | IPR010987 |
| ProSiteProfiles | PS50404 | Soluble glutathione S-transferase N-terminal domain profile. | 10 | 89 | 15.701989 | IPR004045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 510 | 526 | 1.7E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 528 | 543 | 1.7E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 546 | 564 | 1.7E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 463 | 483 | 1.7E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 568 | 585 | 1.7E-13 | IPR006044 |
| SFLD | SFLDG00358 | Main (cytGST) | 19 | 188 | 6.6E-29 | - |
| SFLD | SFLDS00019 | Glutathione Transferase (cytosolic) | 19 | 188 | 6.6E-29 | IPR040079 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_051225265.1 | legumin B-like [Lolium perenne] | 0 |
| Q65XA0 | Probable glutathione S-transferase DHAR1, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=DHAR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6YPB6 | Cupin type-1 domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology