Basic Information
Locus ID:
gene-QYE76_030513
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 102048363 | 102051033 | + | gene-QYE76_030513 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 30,006.13 Da | 62.94 | 56.00 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12420 | RRM_RBPMS_like | 181 | 263 | 4.64823E-35 | - |
| Pfam | PF00076 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 183 | 253 | 2.6E-12 | IPR000504 |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 163 | 275 | 7.12E-15 | IPR035979 |
| Gene3D | G3DSA:3.30.70.330 | - | 177 | 267 | 5.3E-19 | IPR012677 |
| SMART | SM00360 | rrm1_1 | 182 | 263 | 2.2E-7 | IPR000504 |
| ProSiteProfiles | PS50102 | Eukaryotic RNA Recognition Motif (RRM) profile. | 181 | 267 | 12.236282 | IPR000504 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 70 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76940.1 | RNA-binding (RRM/RBD/RNP motifs) family protein. | 0 |
| RefSeq | XP_047046635.1 | nuclear speckle RNA-binding protein A-like [Lolium rigidum] | 0 |
| Q6JB11 | Protein MATERNALLY EXPRESSED GENE 5 OS=Zea mays OX=4577 GN=MEG5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6SJV0 | RRM domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology