Basic Information
Locus ID:
gene-QYE76_030419
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
CPK24
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 98411207 | 98413263 | - | gene-QYE76_030419 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 63,028.44 Da | 42.59 | 76.86 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 484 | 541 | 8.14902E-17 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 76 | 364 | 5.76071E-125 | - |
| Pfam | PF13499 | EF-hand domain pair | 415 | 471 | 2.4E-9 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 484 | 540 | 5.5E-11 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 132 | 365 | 4.6E-60 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 389 | 553 | 3.59E-40 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 72 | 378 | 4.32E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 65 | 188 | 1.5E-16 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 374 | 544 | 8.3E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 189 | 373 | 1.2E-62 | - |
| SMART | SM00054 | efh_1 | 515 | 543 | 1.3E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 412 | 440 | 0.27 | IPR002048 |
| SMART | SM00054 | efh_1 | 484 | 512 | 1.1 | IPR002048 |
| SMART | SM00220 | serkin_6 | 77 | 365 | 1.9E-94 | IPR000719 |
| SMART | SM00054 | efh_1 | 448 | 476 | 0.91 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 77 | 365 | 46.209007 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 480 | 507 | 9.910664 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 511 | 546 | 13.397589 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 408 | 443 | 13.927603 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 444 | 479 | 9.380651 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 83 | 106 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 421 | 433 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 227 | 239 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 457 | 469 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 524 | 536 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_047071063.1 | calcium-dependent protein kinase 21-like [Lolium rigidum] | 0 |
| Q6ZIU9 | Calcium-dependent protein kinase 21 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453RPR5 | Calcium-dependent protein kinase 30 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH08.2242, BH08.2372, CH08.2548 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0638190, gene-QOZ80_8BG0667730 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0686030.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_030419, gene-QYE76_061945 |
| Poaceae | Oryza coarctata | 2 | Oco15G013700, Oco16G012880 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g42750.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_07G210600 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0403526 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr20G002420, Chr29G001060 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G466300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG034960, gene_TRIDC7BG026070 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G267000.1, TraesCS7B02G165200.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb198360_P004 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-17565 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g24464 |