Basic Information
Locus ID:
gene-QYE76_030415
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Anaphase-promoting complex subunit 4 WD40 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 98333767 | 98335542 | - | gene-QYE76_030415 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 50,741.63 Da | 46.61 | 76.47 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 182 | 239 | 2.5E-6 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 264 | 298 | 1.3E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 315 | 353 | 0.001 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 134 | 439 | 9.89E-52 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 89 | 441 | 1.8E-109 | IPR015943 |
| SMART | SM00320 | WD40_4 | 174 | 213 | 2.4E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 356 | 396 | 52.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 259 | 298 | 2.9E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 311 | 353 | 8.9E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 216 | 255 | 37.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 399 | 438 | 8.2E-4 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 266 | 299 | 10.917412 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 181 | 213 | 8.57106 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 266 | 307 | 14.017362 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 406 | 439 | 8.808332 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 181 | 222 | 11.611251 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 406 | 439 | 10.475033 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 285 | 299 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 425 | 439 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33260.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.2) | 0 |
| RefSeq | XP_051202889.1 | cell division cycle 20.2, cofactor of APC complex-like [Lolium perenne] | 0 |
| Q9S7I8 | Cell division cycle 20.2, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-2 PE=1 SV=1 | 0 | |
| TrEMBL | C5XZL9 | ANAPC4_WD40 domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3004G119700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology