Basic Information
Locus ID:
gene-QYE76_030222
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
UBP2
Description:
Ubiquitinyl hydrolase 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 91908939 | 91913966 | - | gene-QYE76_030222 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 101,335.97 Da | 53.02 | 70.67 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 322 | 906 | 2.9E-36 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 321 | 908 | 1.71E-58 | IPR038765 |
| SUPERFAMILY | SSF57850 | RING/U-box | 161 | 229 | 2.0E-5 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 313 | 504 | 9.0E-24 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 633 | 911 | 2.4E-34 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 128 | 244 | 7.4E-6 | IPR013083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 318 | 909 | 31.634472 | IPR028889 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 162 | 233 | 11.547367 | IPR001607 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 844 | 862 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 645 | 660 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 548 | 568 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 623 | 666 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 568 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 129 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32780.1 | ubiquitin-specific protease 1. | 0 |
| RefSeq | XP_047056934.1 | ubiquitin carboxyl-terminal hydrolase 45-like [Lolium rigidum] | 0 |
| Q9FPT5 | Ubiquitin carboxyl-terminal hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=UBP1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8I6YV54 | USP domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology