Basic Information
Locus ID:
gene-QYE76_030219
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 91767180 | 91771341 | - | gene-QYE76_030219 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 65,894.35 Da | 44.20 | 73.29 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 239 | 586 | 1.8E-27 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 237 | 588 | 1.59E-47 | IPR038765 |
| SUPERFAMILY | SSF57850 | RING/U-box | 81 | 149 | 9.54E-6 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 233 | 593 | 1.5E-46 | - |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 79 | 153 | 11.239674 | IPR001607 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 238 | 589 | 28.945057 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 524 | 542 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| Coils | Coil | Coil | 326 | 346 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04860.1 | ubiquitin-specific protease 2. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_047044951.1 | ubiquitin carboxyl-terminal hydrolase 2-like [Lolium rigidum] | 0 |
| Q8W4N3 | Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=UBP2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6TIT6 | USP domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology