Basic Information
Locus ID:
gene-QYE76_030218
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 91760352 | 91761503 | - | gene-QYE76_030218 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 42,157.27 Da | 51.56 | 72.58 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02148 | Zn-finger in ubiquitin-hydrolases and other protein | 36 | 84 | 1.1E-6 | IPR001607 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 207 | 314 | 7.0E-14 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 203 | 362 | 3.53E-27 | IPR038765 |
| SUPERFAMILY | SSF57850 | RING/U-box | 18 | 84 | 5.56E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 9 | 110 | 2.1E-7 | IPR013083 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 192 | 382 | 5.9E-28 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 206 | 383 | 17.572264 | IPR028889 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 13 | 90 | 11.536177 | IPR001607 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 207 | 222 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 383 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051203053.1 | uncharacterized protein LOC127316646 [Lolium perenne] | 0 |
| Q9P275 | Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens OX=9606 GN=USP36 PE=1 SV=4 | 0 | |
| TrEMBL | A0A3B6TE39 | USP domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology