Basic Information
Locus ID:
gene-QYE76_030216
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Prokaryotic RING finger family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 91752452 | 91753216 | - | gene-QYE76_030216 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 25,776.70 Da | 61.92 | 74.13 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 208 | 243 | 2.10763E-8 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 204 | 249 | 1.5E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 205 | 250 | 3.76E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 191 | 254 | 8.1E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 206 | 243 | 1.1E-6 | IPR001841 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 31 | 6.0 | - |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 206 | 244 | 11.648357 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 221 | 230 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 147 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G13100.3 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_047070048.1 | putative E3 ubiquitin-protein ligase XBAT35 [Lolium rigidum] | 0 |
| TrEMBL | A0A453RMC6 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology